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  5. LOC_Os01g71780.1

LOC_Os01g71780.1 (LOC_Os01g71780)


Aliases : LOC_Os01g71780

Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 202.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71780.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G50390 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g00763 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene44877.t1 Aspi01Gene44877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3305.g115285 No alias not classified & original description: CDS=1-1707 0.03 OrthoFinder output from all 47 species
Cba_g01982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g26745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_6069993g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g56732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020851 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Smo66275 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g090150.1.1 Solyc02g090150 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc07g025140.4.1 Solyc07g025140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g35902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005608_P001 Zm00001e005608 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 364 402
IPR001680 WD40_repeat 219 253
IPR001680 WD40_repeat 185 213
No external refs found!