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  5. LOC_Os01g71770.1

LOC_Os01g71770.1 (LOC_Os01g71770)


Aliases : LOC_Os01g71770

Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 115.0)


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71770.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g024000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37304.t1 Aspi01Gene37304 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_888587g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g04284 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008252 nucleotidase activity IEP HCCA
MF GO:0008253 5'-nucleotidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009166 nucleotide catabolic process IEP HCCA
BP GO:0009262 deoxyribonucleotide metabolic process IEP HCCA
BP GO:0009264 deoxyribonucleotide catabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901292 nucleoside phosphate catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 5 64
IPR000504 RRM_dom 232 289
IPR000504 RRM_dom 94 161
No external refs found!