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  5. LOC_Os01g71740.1

LOC_Os01g71740.1 (BAT1, LOC_Os01g71740)


Aliases : BAT1, LOC_Os01g71740

Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71740.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00246830 BAT1,... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Aob_g22486 BAT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25166 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g62850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70269.t1 BAT1, Aspi01Gene70269 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42234.1 BAT1, LOC_Os01g42234 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g71760.1 BAT1, LOC_Os01g71760 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Pp3c4_15080V3.1 Pp3c4_15080 bidirectional amino acid transporter 1 0.02 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027841_P002 BAT1, Zm00001e027841 gamma-aminobutyric acid transporter (GABP) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 34 490
No external refs found!