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  5. LOC_Os01g71700.1

LOC_Os01g71700.1 (BAT1, LOC_Os01g71700)


Aliases : BAT1, LOC_Os01g71700

Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71700.1

Target Alias Description ECC score Gene Family Method Actions
AT2G01170 BAT1 bidirectional amino acid transporter 1 0.03 OrthoFinder output from all 47 species
Ala_g28453 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.06 OrthoFinder output from all 47 species
Aob_g12593 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Aob_g14969 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g25166 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.07 OrthoFinder output from all 47 species
Aop_g62850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07283.t1 BAT1, Aspi01Gene07283 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36294.t1 BAT1, Aspi01Gene36294 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48439.t1 BAT1, Aspi01Gene48439 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70269.t2 BAT1, Aspi01Gene70269 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G079000.1 BAT1, Ceric.12G079000 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02293 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g28143 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g34930 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g39810 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Dde_g23649 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g22282 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008812001 BAT1 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Gb_25392 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Len_g10788 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Len_g18023 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Len_g20177 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Len_g22396 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
MA_10426763g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_10435539g0010 BAT1 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
MA_6210082g0010 BAT1 Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g06265 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Msp_g10060 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Msp_g27472 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13339 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g39830 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.06 OrthoFinder output from all 47 species
Smo438585 BAT1 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Smo438586 BAT1 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Smo88146 BAT1 Solute transport.carrier-mediated transport.APC... 0.05 OrthoFinder output from all 47 species
Smo95941 BAT1 Solute transport.carrier-mediated transport.APC... 0.08 OrthoFinder output from all 47 species
Spa_g11812 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Spa_g19345 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e018674_P001 BAT1, Zm00001e018674 gamma-aminobutyric acid transporter (GABP) 0.07 OrthoFinder output from all 47 species
Zm00001e018676_P002 BAT1, Zm00001e018676 gamma-aminobutyric acid transporter (GABP) 0.08 OrthoFinder output from all 47 species
Zm00001e018679_P001 BAT1, Zm00001e018679 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 36 492
No external refs found!