LOC_Os01g70220.1


Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation


Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0003698 (LandPlants) Phylogenetic Tree(s): OG_02_0003698_tree ,
OG_03_0004446 (SeedPlants) Phylogenetic Tree(s): OG_03_0004446_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70220.1
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AT5G13960 SDG33, SUVH4, KYP SU(VAR)3-9 homolog 4 0.04 Archaeplastida
GSVIVT01025844001 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.03 Archaeplastida
Gb_01720 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_37876g0020 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.03 Archaeplastida
Pp3c4_9720V3.1 No alias SU(VAR)3-9 homolog 4 0.02 Archaeplastida
Zm00001e027327_P003 No alias class V/Su(var) histone methyltransferase component of... 0.02 Archaeplastida
Gb_01720 No alias no hits & (original description: none) 0.04 LandPlants
MA_37876g0020 No alias Histone-lysine N-methyltransferase, H3 lysine-9 specific... 0.02 LandPlants
Pp3c4_9720V3.1 No alias SU(VAR)3-9 homolog 4 0.02 LandPlants
Gb_01720 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc02g094520.3.1 No alias class V/Su(var) histone methyltransferase component of... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA Interproscan
BP GO:0034968 histone lysine methylation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007728 Pre-SET_dom 376 478
IPR001214 SET_dom 497 633
IPR003105 SRA_YDG 186 346
No external refs found!