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  5. LOC_Os01g71050.1

LOC_Os01g71050.1 (VAP27-2, LOC_Os01g71050)


Aliases : VAP27-2, LOC_Os01g71050

Description : contact site protein (VAP27) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG0000655 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g71050.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00149330 VAP27-2,... Vesicle-associated protein 1-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g102804 PVA12 contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
Aev_g06634 PVA12 contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
LOC_Os04g46780.1 LOC_Os04g46780 contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
Lfl_g10766 PVA12 contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
Nbi_g06542 VAP27, VAP27-1,... contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
Pir_g10068 PVA12 contact site protein (VAP27) of... 0.02 OrthoFinder output from all 47 species
Pir_g12389 No alias contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species
Pir_g24850 No alias contact site protein (VAP27) of... 0.03 OrthoFinder output from all 47 species
Tin_g28738 No alias contact site protein (VAP27) of... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000535 MSP_dom 8 102
No external refs found!