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Aliases : LD, LOC_Os01g70810
Description : transcription factor (LD)
Gene families : OG0006989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006989_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g70810.1 | |
| Cluster | HCCA: Cluster_61 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g104695 | LD | flowering time factor *(LD) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25551 | LD | flowering time factor *(LD) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08139 | LD | flowering time factor *(LD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43861 | LD | flowering time factor *(LD) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g17620 | LD | flowering time factor *(LD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g02925 | LD | flowering time factor *(LD) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g02445 | LD | flowering time factor *(LD) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Mp5g13160.1 | LD | transcription factor (LD). C3H zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g14684 | LD | flowering time factor *(LD) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g27547 | LD | flowering time factor *(LD) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g18899 | LD | flowering time factor *(LD) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g02417 | LD | flowering time factor *(LD) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g074690.3.1 | LD, Solyc09g074690 | transcription factor (LD) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g074730.3.1 | LD, Solyc09g074730 | transcription factor (LD) | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g50354 | LD | flowering time factor *(LD) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09510 | LD | flowering time factor *(LD) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018725_P004 | LD, Zm00001e018725 | transcription factor (LD) | 0.09 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |