LOC_Os01g70810.1 (LD, LOC_Os01g70810)


Aliases : LD, LOC_Os01g70810

Description : transcription factor (LD)


Gene families : OG0006989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006989_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70810.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Adi_g104695 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25551 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08139 LD flowering time factor *(LD) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43861 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g17620 LD flowering time factor *(LD) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g02925 LD flowering time factor *(LD) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g02445 LD flowering time factor *(LD) & original description: none 0.05 OrthoFinder output from all 47 species
Mp5g13160.1 LD transcription factor (LD). C3H zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Msp_g14684 LD flowering time factor *(LD) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g27547 LD flowering time factor *(LD) & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g18899 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02417 LD flowering time factor *(LD) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc09g074690.3.1 LD, Solyc09g074690 transcription factor (LD) 0.03 OrthoFinder output from all 47 species
Solyc09g074730.3.1 LD, Solyc09g074730 transcription factor (LD) 0.06 OrthoFinder output from all 47 species
Spa_g50354 LD flowering time factor *(LD) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09510 LD flowering time factor *(LD) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018725_P004 LD, Zm00001e018725 transcription factor (LD) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!