LOC_Os01g70680.1 (LOC_Os01g70680)


Aliases : LOC_Os01g70680

Description : defensin (PDF2)


Gene families : OG0007968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007968_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70680.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT2G02100 LCR69, PDF2.2 low-molecular-weight cysteine-rich 69 0.04 OrthoFinder output from all 47 species
AT2G02147 LCR73 low-molecular-weight cysteine-rich 73 0.03 OrthoFinder output from all 47 species
AT2G31953 LCR76 low-molecular-weight cysteine-rich 76 0.03 OrthoFinder output from all 47 species
AT5G63660 LCR74, PDF2.5 Scorpion toxin-like knottin superfamily protein 0.05 OrthoFinder output from all 47 species
LOC_Os04g44130.1 LOC_Os04g44130 defensin (PDF2) 0.03 OrthoFinder output from all 47 species
Solyc04g008470.3.1 PDF2.3, LCR68,... defensin (PDF2) 0.03 OrthoFinder output from all 47 species
Solyc07g007730.4.1 LCR69, PDF2.2,... defensin (PDF2) 0.04 OrthoFinder output from all 47 species
Solyc11g006260.2.1 LCR74, PDF2.5,... defensin (PDF2) 0.05 OrthoFinder output from all 47 species
Zm00001e033203_P001 LCR75, LCR79,... defensin (PDF2) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!