LOC_Os01g70360.1 (LCB2, LOC_Os01g70360)


Aliases : LCB2, LOC_Os01g70360

Description : catalytic subunit 2 of serine C-palmitoyltransferase complex


Gene families : OG0003878 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003878_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g70360.1
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G007200.1 LCB2, Ceric.03G007200 EC_2.3 acyltransferase & original description:... 0.02 OrthoFinder output from all 47 species
Cre04.g230144 LCB2 Lipid metabolism.sphingolipid metabolism.serine... 0.02 OrthoFinder output from all 47 species
Ehy_g06847 LCB2 EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033008001 LCB2 Lipid metabolism.sphingolipid metabolism.serine... 0.05 OrthoFinder output from all 47 species
Zm00001e021503_P002 LCB2, Zm00001e021503 catalytic subunit 2 of serine C-palmitoyltransferase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 112 470
No external refs found!