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  5. LOC_Os01g68960.1

LOC_Os01g68960.1 (LOC_Os01g68960)


Aliases : LOC_Os01g68960

Description : no hits & (original description: none)


Gene families : OG0008881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68960.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT3G07150 No alias unknown protein; Has 19 Blast hits to 19 proteins in 8... 0.08 OrthoFinder output from all 47 species
Ehy_g03176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003279001 No alias No description available 0.11 OrthoFinder output from all 47 species
Lfl_g16160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14080 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g24923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e028470_P002 Zm00001e028470 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!