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  5. LOC_Os01g68860.1

LOC_Os01g68860.1 (ZFN1, LOC_Os01g68860)


Aliases : ZFN1, LOC_Os01g68860

Description : C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68860.1

Target Alias Description ECC score Gene Family Method Actions
AT3G48440 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.04 OrthoFinder output from all 47 species
Als_g59230 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g62437 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aob_g11692 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0384.g067499 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g20210 ZFN1 regulatory protein of RNA homeostasis & original... 0.07 OrthoFinder output from all 47 species
Cre16.g689535 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Dcu_g13010 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dde_g02931 ZFN3 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dde_g12571 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01019118001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
MA_10435282g0010 No alias C3H zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Mp2g10620.1 No alias C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g20953 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Pnu_g11418 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g17909 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g22509 No alias regulatory protein of RNA homeostasis & original... 0.01 OrthoFinder output from all 47 species
Pnu_g32665 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Zm00001e018849_P004 ZFN1, Zm00001e018849 C3H zinc finger transcription factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 380 404
IPR000571 Znf_CCCH 174 198
IPR000571 Znf_CCCH 127 152
IPR000571 Znf_CCCH 82 107
IPR000571 Znf_CCCH 334 359
No external refs found!