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  5. LOC_Os01g68540.1

LOC_Os01g68540.1 (SCN1, LOC_Os01g68540)


Aliases : SCN1, LOC_Os01g68540

Description : guanine nucleotide dissociation inhibitor (RopGDI)


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68540.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00173830 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AT1G12070 No alias Immunoglobulin E-set superfamily protein 0.07 OrthoFinder output from all 47 species
AT1G62450 No alias Immunoglobulin E-set superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G07880 SCN1 Immunoglobulin E-set superfamily protein 0.02 OrthoFinder output from all 47 species
Ala_g16981 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Als_g00548 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.04 OrthoFinder output from all 47 species
Aop_g20988 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.01 OrthoFinder output from all 47 species
Dde_g13147 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.04 OrthoFinder output from all 47 species
Len_g21785 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Lfl_g37795 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Msp_g21563 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Msp_g39473 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006319 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011233 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023612 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Sam_g50701 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Solyc05g054110.3.1 SCN1, Solyc05g054110 guanine nucleotide dissociation inhibitor (RopGDI) 0.03 OrthoFinder output from all 47 species
Tin_g26735 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Zm00001e027138_P001 SCN1, Zm00001e027138 guanine nucleotide dissociation inhibitor (RopGDI) 0.06 OrthoFinder output from all 47 species
Zm00001e027139_P001 SCN1, Zm00001e027139 guanine nucleotide dissociation inhibitor (RopGDI) 0.09 OrthoFinder output from all 47 species
Zm00001e031533_P001 SCN1, Zm00001e031533 guanine nucleotide dissociation inhibitor (RopGDI) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP HCCA
InterPro domains Description Start Stop
IPR000406 Rho_GDI 24 212
No external refs found!