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  5. LOC_Os01g68330.1

LOC_Os01g68330.1 (ATTAP1, TAP1, LOC_Os01g68330)


Aliases : ATTAP1, TAP1, LOC_Os01g68330

Description : subfamily ABCB transporter


Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g68330.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g09025 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00756 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0068.g036348 ALS1, ATTAP2, TAP2 subfamily ABCB transporter & original description: CDS=1349-2728 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021434.18 ATTAP1, TAP1 ABC transporter B family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g02863 ALS1, ATTAP2, TAP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07653 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13945 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g18530.1 ATTAP1, TAP1 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Ore_g06148 ALS1, ATTAP2, TAP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12590 ATTAP1, TAP1 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28543 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g070270.2.1 ATTAP1, TAP1,... subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Zm00001e018873_P003 ATTAP1, TAP1,... subfamily ABCB transporter 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 160 226
IPR003439 ABC_transporter-like_ATP-bd 322 468
No external refs found!