LOC_Os01g69970.1


Description : E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana (sp|p43254|cop1_arath : 86.7)


Gene families : OG_01_0005197 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005197_tree ,
OG_02_0005293 (LandPlants) Phylogenetic Tree(s): OG_02_0005293_tree ,
OG_03_0005982 (SeedPlants) Phylogenetic Tree(s): OG_03_0005982_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g69970.1
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00233250 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT4G18905 No alias Transducin/WD40 repeat-like superfamily protein 0.15 Archaeplastida
Cre01.g035000 No alias No description available 0.17 Archaeplastida
Mp3g14260.1 No alias E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c4_20160V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.11 Archaeplastida
Solyc04g005330.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018802_P001 No alias no hits & (original description: none) 0.13 Archaeplastida
AMTR_s00003p00233250 evm_27.TU.AmTr_v1... No description available 0.02 LandPlants
AT4G18905 No alias Transducin/WD40 repeat-like superfamily protein 0.15 LandPlants
Mp3g14260.1 No alias E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c4_20160V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.09 LandPlants
Solyc04g005330.3.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e018802_P001 No alias no hits & (original description: none) 0.12 LandPlants
AMTR_s00003p00233250 evm_27.TU.AmTr_v1... No description available 0.02 SeedPlants
AT4G18905 No alias Transducin/WD40 repeat-like superfamily protein 0.15 SeedPlants
MA_102794g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_19206g0010 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc04g005330.3.1 No alias no hits & (original description: none) 0.04 SeedPlants
Zm00001e018802_P001 No alias no hits & (original description: none) 0.12 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 252 317
IPR001680 WD40_repeat 447 474
IPR001680 WD40_repeat 391 429
No external refs found!