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  5. LOC_Os01g67240.1

LOC_Os01g67240.1 (AHF1, FH1, AFH1,...)


Aliases : AHF1, FH1, AFH1, ATFH1, LOC_Os01g67240

Description : group-I formin actin filament elongation factor


Gene families : OG0001137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g67240.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00223690 ATFH8, FH8,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
AT1G59910 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
AT2G43800 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
AT3G05470 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
AT3G07540 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
AT3G25500 AHF1, FH1, AFH1, ATFH1 formin homology 1 0.04 OrthoFinder output from all 47 species
AT5G48360 No alias Actin-binding FH2 (formin homology 2) family protein 0.03 OrthoFinder output from all 47 species
Aop_g35617 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g10525 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Mp8g08720.1 ATFH5, Fh5 group-I formin actin filament elongation factor.... 0.02 OrthoFinder output from all 47 species
Pir_g45335 FH6, ATFH6 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g30754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g006430.3.1 ATFH8, FH8,... group-I formin actin filament elongation factor 0.04 OrthoFinder output from all 47 species
Solyc07g064010.3.1 ATFH5, Fh5,... group-I formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Solyc12g019480.3.1 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Spa_g52891 AHF1, FH1, AFH1, ATFH1 group-I formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e012597_P001 FH6, ATFH6,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e015771_P001 ATFH8, FH8,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species
Zm00001e028560_P002 AHF1, FH1, AFH1,... group-I formin actin filament elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 499 903
No external refs found!