LOC_Os01g66379.1 (LOC_Os01g66379)

Aliases : LOC_Os01g66379

Description : no hits & (original description: none)

Gene families : OG0003897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003897_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g66379.1
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
Aob_g21501	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g26119	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g17060	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g43914	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g17122	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g53334	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g54377	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo415236	No alias	Cytoskeleton.microtubular network.microtubule...	0.02	OrthoFinder output from all 47 species
Spa_g11561	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e019022_P003	Zm00001e019022	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	IEA	Interproscan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000352	Pep_chain_release_fac_I	86	143

External Links

No external refs found!