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  5. LOC_Os01g66100.1

LOC_Os01g66100.1 (GA5, GA20OX1,...)


Aliases : GA5, GA20OX1, ATGA20OX1, AT2301, LOC_Os01g66100

Description : gibberellin 20-oxidase


Gene families : OG0003609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g66100.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00187150 GA5, GA20OX1,... Phytohormones.gibberellin.synthesis.gibberellin 20-oxidase 0.04 OrthoFinder output from all 47 species
AT5G07200 ATGA20OX3,... gibberellin 20-oxidase 3 0.03 OrthoFinder output from all 47 species
Aspi01Gene55671.t1 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Gb_19227 GA5, GA20OX1,... gibberellin 20-oxidase 0.12 OrthoFinder output from all 47 species
Pnu_g05556 GA5, GA20OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Smo115673 ATGA20OX3,... Gibberellin 20 oxidase 1-D OS=Triticum aestivum 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
InterPro domains Description Start Stop
IPR026992 DIOX_N 64 168
IPR005123 Oxoglu/Fe-dep_dioxygenase 227 324
No external refs found!