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  5. LOC_Os01g66050.1

LOC_Os01g66050.1 (LOC_Os01g66050)


Aliases : LOC_Os01g66050

Description : Ubinuclein-1 OS=Arabidopsis thaliana (sp|q8rx78|ubn1_arath : 198.0)


Gene families : OG0002157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g66050.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G77310 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
Aob_g03526 No alias component *(UBN) of HIRA chaperone complex & original... 0.02 OrthoFinder output from all 47 species
Dcu_g19398 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g32525 No alias component *(UBN) of HIRA chaperone complex & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008808001 No alias Ubinuclein-1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp2g14320.1 No alias Ubinuclein-1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g44164 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Sam_g13994 No alias component *(UBN) of HIRA chaperone complex & original... 0.03 OrthoFinder output from all 47 species
Smo440877 No alias Ubinuclein-2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g005130.2.1 Solyc11g005130 Ubinuclein-1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e019054_P001 Zm00001e019054 Ubinuclein-1 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!