1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g65900.1

LOC_Os01g65900.1 (SCL1, LOC_Os01g65900)


Aliases : SCL1, LOC_Os01g65900

Description : transcription factor (GRAS)


Gene families : OG0000550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000550_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g65900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00136400 PAT1,... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
AMTR_s00088p00161000 PAT1,... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00186p00018500 SCL1,... RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
AT1G21450 SCL1 SCARECROW-like 1 0.05 OrthoFinder output from all 47 species
Adi_g108349 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21753 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50028 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0011.g012766 PAT1 GRAS-type transcription factor & original description: CDS=1-1848 0.03 OrthoFinder output from all 47 species
Dcu_g05689 PAT1 GRAS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g19426 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01366 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010007001 SCL1 RNA biosynthesis.transcriptional activation.GRAS... 0.04 OrthoFinder output from all 47 species
LOC_Os03g09280.2 PAT1, LOC_Os03g09280 transcription factor (GRAS) 0.05 OrthoFinder output from all 47 species
Len_g17559 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g064550.1.1 SCL1, Solyc04g064550 transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species
Solyc05g054170.4.1 SCL13, Solyc05g054170 transcription factor (GRAS) 0.06 OrthoFinder output from all 47 species
Solyc06g035620.3.1 PAT1, Solyc06g035620 transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species
Solyc12g005340.3.1 PAT1, Solyc12g005340 transcription factor (GRAS) 0.02 OrthoFinder output from all 47 species
Spa_g07387 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14334 PAT1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15312 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23112 PAT1 GRAS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e035384_P001 PAT1, Zm00001e035384 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species
Zm00001e038811_P001 PAT1, Zm00001e038811 transcription factor (GRAS) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005202 TF_GRAS 184 553
No external refs found!