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  5. LOC_Os01g65860.1

LOC_Os01g65860.1 (LOC_Os01g65860)


Aliases : LOC_Os01g65860

Description : Putative clathrin assembly protein At1g03050 OS=Arabidopsis thaliana (sp|q9sa65|cap4_arath : 284.0)


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g65860.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0064.g035491 No alias not classified & original description: CDS=1-2046 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.02 OrthoFinder output from all 47 species
Dde_g21488 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44471 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07886 No alias accessory protein *(PlCALM3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g17254 No alias accessory protein *(PlCALM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g13695 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07860 No alias accessory protein *(PlCALM3) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g01342 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g08761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Zm00001e029642_P001 Zm00001e029642 Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 33 336
No external refs found!