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  5. LOC_Os01g65440.1

LOC_Os01g65440.1 (LOC_Os01g65440)


Aliases : LOC_Os01g65440

Description : no hits & (original description: none)


Gene families : OG0001830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g65440.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00177090 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00070p00184710 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
Aev_g09469 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g00954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29053 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012253001 MRH6 No description available 0.04 OrthoFinder output from all 47 species
Gb_04683 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_26614 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g31710.1 LOC_Os12g31710 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_10142206g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g16409 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24071 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g114820.3.1 Solyc03g114820 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc06g060360.3.1 Solyc06g060360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g069270.1.1 Solyc06g069270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e004968_P001 MRH6, Zm00001e004968 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e019100_P001 Zm00001e019100 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027011_P002 Zm00001e027011 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e039611_P004 Zm00001e039611 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 85 218
No external refs found!