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  5. LOC_Os01g64760.1

LOC_Os01g64760.1 (LOC_Os01g64760)


Aliases : LOC_Os01g64760

Description : YPT protein of trans-Golgi-network (TGN) trafficking


Gene families : OG0003354 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003354_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g64760.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00216980 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane... 0.07 OrthoFinder output from all 47 species
Adi_g079566 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Aop_g12289 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001024.25 No alias Vesicle trafficking.endomembrane... 0.02 OrthoFinder output from all 47 species
Cre07.g326400 No alias Vesicle trafficking.endomembrane... 0.04 OrthoFinder output from all 47 species
Dac_g15736 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Dcu_g04403 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Ehy_g02088 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
MA_209678g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04435 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.04 OrthoFinder output from all 47 species
Nbi_g29804 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Solyc07g018220.3.1 Solyc07g018220 YPT protein of trans-Golgi-network (TGN) trafficking 0.04 OrthoFinder output from all 47 species
Tin_g04480 No alias component *(YIP4) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Zm00001e019161_P001 Zm00001e019161 YPT protein of trans-Golgi-network (TGN) trafficking 0.12 OrthoFinder output from all 47 species
Zm00001e028666_P001 Zm00001e028666 YPT protein of trans-Golgi-network (TGN) trafficking 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR006977 Yip1_dom 128 253
No external refs found!