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  5. LOC_Os01g64650.2

LOC_Os01g64650.2 (YKT61, ATGP1,...)


Aliases : YKT61, ATGP1, ATYKT61, LOC_Os01g64650

Description : YKT6-type R-type SNARE longin protein


Gene families : OG0002670 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g64650.2

Target Alias Description ECC score Gene Family Method Actions
AT5G58060 YKT61, ATGP1, ATYKT61 SNARE-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g068704 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Cba_g15752 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ceric.34G069200.1 YKT61, ATGP1,... R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.58 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre17.g728150 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
GSVIVT01003730001 YKT61, ATGP1, ATYKT61 Vesicle trafficking.SNARE target membrane recognition... 0.03 OrthoFinder output from all 47 species
Nbi_g44160 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ore_g29192 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007907 YKT61, ATGP1, ATYKT61 R-type YKT6-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 60 128
IPR001388 Synaptobrevin-like 154 211
No external refs found!