LOC_Os01g63854.1 (LOC_Os01g63854)


Aliases : LOC_Os01g63854

Description : gamma-aminobutyric acid transporter (GAT)


Gene families : OG0000375 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g63854.1

Target Alias Description ECC score Gene Family Method Actions
AT1G08230 No alias No description available 0.03 OrthoFinder output from all 47 species
Adi_g117649 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117650 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Aev_g37867 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g03002 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g10671 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Als_g11432 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Als_g17270 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.06 OrthoFinder output from all 47 species
Als_g52032 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Aob_g03268 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31031.t1 Aspi01Gene31031 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene31033.t1 Aspi01Gene31033 gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene31541.t1 Aspi01Gene31541 gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene31543.t1 Aspi01Gene31543 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0042.g026938 No alias not classified & original description: CDS=503-2446 0.03 OrthoFinder output from all 47 species
Cba_g21761 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Cba_g30721 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.06 OrthoFinder output from all 47 species
Cba_g38495 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ceric.05G010400.1 Ceric.05G010400 gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ceric.05G056200.1 Ceric.05G056200 gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Dac_g01555 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Dac_g16275 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g16650 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g32092 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g34391 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g36639 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.06 OrthoFinder output from all 47 species
Dcu_g39908 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Dde_g08000 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29452 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031408001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01034729001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01034731001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Gb_33630 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Gb_39426 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
Gb_39427 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Len_g14644 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Len_g20418 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
MA_103912g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
MA_10429687g0010 ATPROT1, PROT1 proline transporter (ProT) 0.03 OrthoFinder output from all 47 species
MA_323417g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
MA_95623g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
MA_9942560g0010 No alias gamma-aminobutyric acid transporter (GAT) 0.02 OrthoFinder output from all 47 species
Mp5g14240.1 No alias gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
Msp_g05142 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Msp_g26375 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g00785 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g14328 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ore_g20340 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g25018 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g06414 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g59285 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g63837 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003815 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Solyc08g082080.3.1 Solyc08g082080 gamma-aminobutyric acid transporter (GAT) 0.03 OrthoFinder output from all 47 species
Solyc11g066800.2.1 Solyc11g066800 gamma-aminobutyric acid transporter (GAT) 0.04 OrthoFinder output from all 47 species
Spa_g17756 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species
Spa_g29689 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50744 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.03 OrthoFinder output from all 47 species
Tin_g07234 No alias gamma-aminobutyric acid transporter *(GAT) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 36 441
No external refs found!