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  5. LOC_Os01g63420.1

LOC_Os01g63420.1 (COI1, LOC_Os01g63420)


Aliases : COI1, LOC_Os01g63420

Description : component COI of jasmonic acid receptor complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g63420.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00270130 AFB3,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT2G39940 COI1 RNI-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G03190 AFB1, ATGRH1, GRH1 GRR1-like protein 1 0.03 OrthoFinder output from all 47 species
Als_g18642 TIR1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g28117 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36472 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene04141.t1 AFB2, Aspi01Gene04141 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06119 TIR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45655 AFB2 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ceric.28G051500.1 AFB2, Ceric.28G051500 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Dcu_g03063 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.06 OrthoFinder output from all 47 species
Dcu_g10257 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
GSVIVT01009126001 AFB5 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_04106 COI1 component COI of jasmonic acid receptor complex 0.03 OrthoFinder output from all 47 species
Len_g13483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06224 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Msp_g15983 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Nbi_g04343 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Nbi_g06279 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Pnu_g18805 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.04 OrthoFinder output from all 47 species
Spa_g09398 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Spa_g28126 COI1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e027505_P001 TIR1, Zm00001e027505 component TIR1/AFB of auxin receptor complex. component... 0.02 OrthoFinder output from all 47 species
Zm00001e028730_P001 COI1, Zm00001e028730 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Zm00001e038839_P001 AFB5, Zm00001e038839 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 113 159
IPR041567 COI1_F-box 54 94
No external refs found!