LOC_Os01g62920.1 (VAN, BLH9, RPL, PNY,...)

Aliases : VAN, BLH9, RPL, PNY, LSN, BLR, HB-6, LOC_Os01g62920

Description : transcription factor (BEL)

Gene families : OG0000268 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000268_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g62920.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00243900	BLH7,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AT1G75430	BLH11	BEL1-like homeodomain 11	0.05	OrthoFinder output from all 47 species
AT4G32980	ATH1	homeobox gene 1	0.03	OrthoFinder output from all 47 species
AT5G02030	VAN, BLH9, RPL,...	POX (plant homeobox) family protein	0.04	OrthoFinder output from all 47 species
Adi_g076144	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g18219	BLH2, SAW1	BEL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g04372	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g18805	BLH7	BEL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g18964	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g21162	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12625	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13083	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene38289.t1	BLH2, SAW1,...	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g20841	BLH2, SAW1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g24929	BLH2, SAW1	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009779001	BLH11	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
GSVIVT01035361001	ATH1	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
Gb_22513	EDA29, BLH1	transcription factor (BEL)	0.03	OrthoFinder output from all 47 species
Gb_23074	BLH2, SAW1	transcription factor (BEL)	0.05	OrthoFinder output from all 47 species
LOC_Os02g13310.1	ATH1, LOC_Os02g13310	transcription factor (BEL)	0.06	OrthoFinder output from all 47 species
MA_10434679g0010	BLH7	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_18002g0010	EDA29, BLH1	transcription factor (BEL)	0.03	OrthoFinder output from all 47 species
Msp_g11390	EDA29, BLH1	BEL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g31675	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63319	BLH7	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009261	EDA29, BLH1	BEL-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0197.g025522	EDA29, BLH1	BEL-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s3593.g028854	EDA29, BLH1	BEL-type transcription factor & original description: CDS=1-492	0.04	OrthoFinder output from all 47 species
Sam_g16554	No alias	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g36571	No alias	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo68227	BLH7	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Solyc06g074120.3.1	EDA29, BLH1,...	transcription factor (BEL)	0.05	OrthoFinder output from all 47 species
Solyc08g065420.3.1	ATH1, Solyc08g065420	transcription factor (BEL)	0.04	OrthoFinder output from all 47 species
Solyc11g068950.3.1	EDA29, BLH1,...	transcription factor (BEL)	0.03	OrthoFinder output from all 47 species
Spa_g52258	EDA29, BLH1	BEL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e000495_P001	BLH7, Zm00001e000495	transcription factor (BEL)	0.03	OrthoFinder output from all 47 species
Zm00001e014436_P001	ATH1, Zm00001e014436	transcription factor (BEL)	0.02	OrthoFinder output from all 47 species
Zm00001e019280_P001	VAN, BLH9, RPL,...	transcription factor (BEL)	0.05	OrthoFinder output from all 47 species
Zm00001e026923_P002	VAN, BLH9, RPL,...	transcription factor (BEL)	0.06	OrthoFinder output from all 47 species
Zm00001e031812_P001	VAN, BLH9, RPL,...	transcription factor (BEL)	0.06	OrthoFinder output from all 47 species
Zm00001e037180_P001	ATH1, Zm00001e037180	transcription factor (BEL)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
CC	GO:0018995	host cellular component	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
CC	GO:0033643	host cell part	IEP	HCCA
CC	GO:0033646	host intracellular part	IEP	HCCA
CC	GO:0033647	host intracellular organelle	IEP	HCCA
CC	GO:0033648	host intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
CC	GO:0042025	host cell nucleus	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006563	POX_dom	184	319
IPR008422	Homeobox_KN_domain	388	427

External Links

No external refs found!

LOC_Os01g62920.1 (VAN, BLH9, RPL, PNY,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation