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  5. LOC_Os01g62260.1

LOC_Os01g62260.1 (LOC_Os01g62260)


Aliases : LOC_Os01g62260

Description : Osmotin-like protein OS=Solanum lycopersicum (sp|q41350|olp1_sollc : 278.0)


Gene families : OG0000168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g62260.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00239680 evm_27.TU.AmTr_v1... Thaumatin-like protein OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00012p00157270 evm_27.TU.AmTr_v1... Osmotin-like protein OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00166890 evm_27.TU.AmTr_v1... Thaumatin-like protein 1 OS=Pyrus pyrifolia 0.05 OrthoFinder output from all 47 species
AT2G28790 No alias Pathogenesis-related thaumatin superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g036256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g044763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g43033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16368.t1 ATLP-3, TLP-3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009928001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_19743 No alias no description available(sp|a4pbq1|crj38_cryja : 302.0) 0.04 OrthoFinder output from all 47 species
Gb_19746 No alias no description available(sp|q5dwg2|crj34_cryja : 239.0) 0.04 OrthoFinder output from all 47 species
Gb_19748 No alias no description available(sp|q4w6c7|crj37_cryja : 309.0) 0.03 OrthoFinder output from all 47 species
Gb_19750 No alias no description available(sp|a4pbq1|crj38_cryja : 266.0) 0.03 OrthoFinder output from all 47 species
Gb_23481 ATLP-3, TLP-3 no description available(sp|q5dwg1|crj35_cryja : 328.0) 0.03 OrthoFinder output from all 47 species
LOC_Os03g13070.1 ATLP-3, TLP-3,... Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g14050.1 LOC_Os03g14050 no description available(sp|q9ff29|pr5k_arath : 238.0) 0.03 OrthoFinder output from all 47 species
LOC_Os09g32280.1 LOC_Os09g32280 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os10g27280.1 LOC_Os10g27280 Thaumatin-like protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10435621g0020 PR5K no description available(sp|q9ff29|pr5k_arath : 309.0) &... 0.04 OrthoFinder output from all 47 species
MA_133779g0010 ATOSM34, OSM34 no description available(sp|q5dwg2|crj34_cryja : 240.0) 0.02 OrthoFinder output from all 47 species
Pir_g10720 ATLP-3, TLP-3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24697 ATOSM34, OSM34 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09564 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Solyc04g007310.2.1 Solyc04g007310 Thaumatin-like protein 1a OS=Malus domestica... 0.02 OrthoFinder output from all 47 species
Solyc06g073000.4.1 Solyc06g073000 no description available(sp|q9ff29|pr5k_arath : 245.0) 0.04 OrthoFinder output from all 47 species
Solyc11g013300.2.1 Solyc11g013300 no description available(sp|q5dwg1|crj35_cryja : 239.0) 0.02 OrthoFinder output from all 47 species
Zm00001e002640_P001 Zm00001e002640 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e013093_P001 Zm00001e013093 Thaumatin-like protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e020930_P001 Zm00001e020930 Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e036000_P001 Zm00001e036000 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001938 Thaumatin 33 246
No external refs found!