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  5. LOC_Os01g62210.1

LOC_Os01g62210.1 (LOC_Os01g62210)


Aliases : LOC_Os01g62210

Description : component mtRPL17 of large ribosomal subunit proteome


Gene families : OG0002243 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002243_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g62210.1
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00266670 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
AT5G09770 No alias Ribosomal protein L17 family protein 0.05 OrthoFinder output from all 47 species
Adi_g008802 No alias component *(uL17m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g00474 No alias component *(uL17m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g06969 No alias component *(uL17m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Azfi_s0489.g073517 No alias component *(uL17m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Ceric.39G012200.1 Ceric.39G012200 component *(uL17m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Cre03.g181350 No alias Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Dde_g00405 No alias component *(uL17m) of large mitoribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01026526001 No alias Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os05g38580.1 LOC_Os05g38580 component mtRPL17 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Msp_g24171 No alias component *(uL17m) of large mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Nbi_g00326 No alias component *(uL17m) of large mitoribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Tin_g36318 No alias component *(uL17m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 17 113
No external refs found!