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  5. LOC_Os01g62200.1

LOC_Os01g62200.1 (LOC_Os01g62200)


Aliases : LOC_Os01g62200

Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 115.0)


Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g62200.1

Target Alias Description ECC score Gene Family Method Actions
AT3G46110 No alias Domain of unknown function (DUF966) 0.05 OrthoFinder output from all 47 species
Adi_g021846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58852.t1 Aspi01Gene58852 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0116.g046319 No alias not classified & original description: CDS=53-2212 0.02 OrthoFinder output from all 47 species
Ceric.10G058400.1 Ceric.10G058400 not classified & original description: pacid=50611779... 0.03 OrthoFinder output from all 47 species
Ceric.23G080300.1 Ceric.23G080300 not classified & original description: pacid=50610288... 0.05 OrthoFinder output from all 47 species
Dac_g16699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g44760.1 LOC_Os08g44760 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_3651g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_40202g0010 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g04028 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g60880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo412562 No alias Protein UPSTREAM OF FLC OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc04g054800.3.1 Solyc04g054800 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g09824 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e000820_P002 Zm00001e000820 Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e033556_P002 Zm00001e033556 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010369 SOK 47 365
No external refs found!