LOC_Os01g61330.1 (LOC_Os01g61330)


Aliases : LOC_Os01g61330

Description : no hits & (original description: none)


Gene families : OG0002418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002418_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61330.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
Adi_g008687 No alias symbiosis factor *(VAPYRIN) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g010714 No alias symbiosis factor *(VAPYRIN) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g087037 No alias symbiosis factor *(VAPYRIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07216 No alias symbiosis factor *(VAPYRIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21071 No alias symbiosis factor *(VAPYRIN) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g02026 No alias symbiosis factor *(VAPYRIN) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00692 No alias symbiosis factor *(VAPYRIN) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58498.t1 Aspi01Gene58498 symbiosis factor *(VAPYRIN) & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.33G051000.1 Ceric.33G051000 not classified & original description: pacid=50606554... 0.02 OrthoFinder output from all 47 species
Dcu_g14540 No alias symbiosis factor *(VAPYRIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g29791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029973001 No alias External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Len_g55783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04147 No alias symbiosis factor *(VAPYRIN) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01286 No alias symbiosis factor *(VAPYRIN) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g095860.3.1 Solyc03g095860 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc10g081500.1.1 Solyc10g081500 symbiosis factor (VAPYRIN) 0.05 OrthoFinder output from all 47 species
Spa_g46270 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e028823_P001 Zm00001e028823 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 283 341
IPR020683 DUF3447 345 406
IPR000535 MSP_dom 42 127
No external refs found!