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  5. LOC_Os01g61310.1

LOC_Os01g61310.1 (LSH6, LOC_Os01g61310)


Aliases : LSH6, LOC_Os01g61310

Description : Protein G1-like7 OS=Oryza sativa subsp. indica (sp|a2xed8|g1l7_orysi : 233.0)


Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61310.1

Target Alias Description ECC score Gene Family Method Actions
AT1G07090 LSH6 Protein of unknown function (DUF640) 0.02 OrthoFinder output from all 47 species
AT3G23290 LSH4 No description available 0.02 OrthoFinder output from all 47 species
AT5G58500 LSH5 Protein of unknown function (DUF640) 0.01 OrthoFinder output from all 47 species
Azfi_s0093.g043261 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0639.g080525 LSH4 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
GSVIVT01023521001 No alias Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... 0.01 OrthoFinder output from all 47 species
Nbi_g02008 LSH4 plant-specific ALOG-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g04394 LSH6 plant-specific ALOG-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Pir_g10175 LSH4 plant-specific ALOG-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc09g025280.1.1 LSH4, Solyc09g025280 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Zm00001e004570_P001 LSH4, Zm00001e004570 Protein G1-like4 OS=Oryza sativa subsp. indica... 0.03 OrthoFinder output from all 47 species
Zm00001e012687_P001 LSH4, Zm00001e012687 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... 0.03 OrthoFinder output from all 47 species
Zm00001e015143_P001 LSH4, Zm00001e015143 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.05 OrthoFinder output from all 47 species
Zm00001e019403_P001 LSH6, Zm00001e019403 Protein G1-like7 OS=Oryza sativa subsp. indica... 0.01 OrthoFinder output from all 47 species
Zm00001e023022_P001 LSH4, Zm00001e023022 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.08 OrthoFinder output from all 47 species
Zm00001e041238_P001 LSH4, Zm00001e041238 Protein G1-like3 OS=Oryza sativa subsp. indica... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006936 ALOG_dom 23 144
No external refs found!