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  5. LOC_Os01g58780.1

LOC_Os01g58780.1 (RHC1A, LOC_Os01g58780)


Aliases : RHC1A, LOC_Os01g58780

Description : Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana (sp|o22197|rhc1a_arath : 202.0)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58780.1

Target Alias Description ECC score Gene Family Method Actions
AT1G14200 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g02298 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.03 OrthoFinder output from all 47 species
Cba_g03836 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
MA_19897g0010 No alias E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g44777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Zm00001e024003_P001 Zm00001e024003 E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 6 36
IPR001841 Znf_RING 191 233
No external refs found!