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  5. LOC_Os01g58220.1

LOC_Os01g58220.1 (LOC_Os01g58220)


Aliases : LOC_Os01g58220

Description : assembly factor (eIF1) of eIF1


Gene families : OG0000506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58220.1

Target Alias Description ECC score Gene Family Method Actions
AT5G54940 No alias Translation initiation factor SUI1 family protein 0.05 OrthoFinder output from all 47 species
Ala_g00314 No alias assembly factor (eIF1) of eIF1 & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene42079.t1 Aspi01Gene42079 assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44085 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03715 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21932 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27668 No alias assembly factor (eIF1) of eIF1 & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27510 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c6_4020V3.1 Pp3c6_4020 Translation initiation factor SUI1 family protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009065 No alias assembly factor (eIF1) of eIF1 & original description:... 0.02 OrthoFinder output from all 47 species
Solyc07g064620.2.1 Solyc07g064620 assembly factor (eIF1) of eIF1 0.03 OrthoFinder output from all 47 species
Spa_g37404 No alias assembly factor (eIF1) of eIF1 & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEA Interproscan
BP GO:0006413 translational initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001950 SUI1 30 101
No external refs found!