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  5. LOC_Os01g58000.1

LOC_Os01g58000.1 (ATPE, LOC_Os01g58000)


Aliases : ATPE, LOC_Os01g58000

Description : subunit epsilon of peripheral CF1 subcomplex of ATP synthase complex


Gene families : OG0007659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g58000.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00184530 ATPB, PB,... Photosynthesis.photophosphorylation.ATP synthase... 0.13 OrthoFinder output from all 47 species
ATCG00470 ATPE ATP synthase epsilon chain 0.21 OrthoFinder output from all 47 species
Aev_g00175 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.38 OrthoFinder output from all 47 species
Aob_g00470 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.19 OrthoFinder output from all 47 species
Ceric.09G048600.1 ATPE, Ceric.09G048600 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.24 OrthoFinder output from all 47 species
Ceric.11G071400.1 ATPE, Ceric.11G071400 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Ceric.1Z017800.1 ATPE, Ceric.1Z017800 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Ceric.1Z161900.1 ATPE, Ceric.1Z161900 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.17 OrthoFinder output from all 47 species
Ceric.24G001600.1 ATPE, Ceric.24G001600 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Dcu_g39139 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.19 OrthoFinder output from all 47 species
Gb_04062 No alias subunit epsilon of peripheral CF1 subcomplex of ATP... 0.19 OrthoFinder output from all 47 species
Gb_06833 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.2 OrthoFinder output from all 47 species
Gb_25936 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.19 OrthoFinder output from all 47 species
LOC_Os06g02980.1 ATPB, PB, LOC_Os06g02980 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.15 OrthoFinder output from all 47 species
Lfl_g18092 ATPE subunit epsilon of peripheral CF1 subcomplex of ATP... 0.31 OrthoFinder output from all 47 species
Smo137774 ATPE Photosynthesis.photophosphorylation.ATP synthase... 0.23 OrthoFinder output from all 47 species
Solyc00g500140.1.1 ATPE, Solyc00g500140 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Solyc01g017220.2.1 ATPE, Solyc01g017220 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Zm00001e003900_P001 ATPE, Zm00001e003900 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.18 OrthoFinder output from all 47 species
Zm00001e042031_P001 ATPE, Zm00001e042031 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.18 OrthoFinder output from all 47 species
Zm00001e042052_P001 ATPE, Zm00001e042052 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.18 OrthoFinder output from all 47 species
Zm00001e042080_P001 ATPE, Zm00001e042080 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.18 OrthoFinder output from all 47 species
Zm00001e042096_P001 ATPE, Zm00001e042096 subunit epsilon of peripheral CF1 subcomplex of ATP... 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015986 proton motive force-driven ATP synthesis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0031361 obsolete integral component of thylakoid membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR020546 ATP_synth_F1_dsu/esu_N 3 82
IPR020547 ATP_synth_F1_esu_C 87 130
No external refs found!