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  5. LOC_Os01g57900.1

LOC_Os01g57900.1 (LOC_Os01g57900)


Aliases : LOC_Os01g57900

Description : Pentatricopeptide repeat-containing protein At1g69290 OS=Arabidopsis thaliana (sp|p0c7r4|pp110_arath : 598.0)


Gene families : OG0001501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001501_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g57900.1

Target Alias Description ECC score Gene Family Method Actions
AT1G68980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17616 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g033104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33799 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 527 570
IPR002885 Pentatricopeptide_repeat 440 484
IPR002885 Pentatricopeptide_repeat 390 412
No external refs found!