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  5. LOC_Os01g57870.1

LOC_Os01g57870.1 (RPS2, LOC_Os01g57870)


Aliases : RPS2, LOC_Os01g57870

Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana (sp|q42484|rps2_arath : 468.0)


Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g57870.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00245910 RPS2,... Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00088510 evm_27.TU.AmTr_v1... No description available 0.1 OrthoFinder output from all 47 species
AMTR_s00050p00210650 evm_27.TU.AmTr_v1... Putative disease resistance protein At1g63350... 0.08 OrthoFinder output from all 47 species
AMTR_s00062p00146080 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00163290 evm_27.TU.AmTr_v1... Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00163330 evm_27.TU.AmTr_v1... Probable disease resistance protein At5g63020... 0.03 OrthoFinder output from all 47 species
AMTR_s00142p00041790 RPS2,... Disease resistance protein RPS2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G12210 RFL1 RPS5-like 1 0.03 OrthoFinder output from all 47 species
AT1G12220 RPS5 Disease resistance protein (CC-NBS-LRR class) family 0.05 OrthoFinder output from all 47 species
AT1G12280 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G61190 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G61310 No alias LRR and NB-ARC domains-containing disease resistance protein 0.04 OrthoFinder output from all 47 species
AT1G63350 No alias Disease resistance protein (CC-NBS-LRR class) family 0.03 OrthoFinder output from all 47 species
AT5G43730 No alias Disease resistance protein (CC-NBS-LRR class) family 0.04 OrthoFinder output from all 47 species
Aob_g32394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18971 ADR1-L2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014595001 No alias Disease resistance protein At4g27190 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
GSVIVT01017142001 RPS5 Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017232001 No alias Disease resistance protein SUMM2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01038391001 No alias Probable disease resistance protein At1g12290... 0.04 OrthoFinder output from all 47 species
Gb_12853 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_12854 RPS2 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_16713 RPS2 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26475 RPS5 Putative disease resistance protein RGA3 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os01g58530.1 RFL1, LOC_Os01g58530 Disease resistance protein SUMM2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Pir_g48677 RPS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g036270.4.1 Solyc02g036270 Probable disease resistance protein At4g27220... 0.02 OrthoFinder output from all 47 species
Solyc08g005500.4.1 Solyc08g005500 Putative late blight resistance protein homolog R1A-6... 0.05 OrthoFinder output from all 47 species
Solyc08g007250.3.1 Solyc08g007250 Disease resistance protein At4g27190 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e019599_P001 RPS2, Zm00001e019599 Disease resistance protein RPS2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 529 588
IPR002182 NB-ARC 153 373
No external refs found!