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Aliases : LOC_Os01g57650
Description : C2H2 zinc finger transcription factor
Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os01g57650.1 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00197580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00199p00026650 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G11490 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G75710 | No alias | C2H2-like zinc finger protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G29660 | No alias | zinc finger (C2H2 type) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G27240 | No alias | zinc finger (C2H2 type) family protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G54630 | No alias | zinc finger protein-related | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g16997 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene16934.t1 | Aspi01Gene16934 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene29956.t1 | Aspi01Gene29956 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48763.t1 | Aspi01Gene48763 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene58391.t1 | Aspi01Gene58391 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024887 | No alias | not classified & original description: CDS=136-1440 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063895 | No alias | not classified & original description: CDS=1048-1284 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g33322 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.32G006400.1 | Ceric.32G006400 | not classified & original description: pacid=50597460... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15387 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g18388 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01008925001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014576001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024778001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_08005 | No alias | C2H2 zinc finger transcription factor. sugar efflux... | 0.01 | OrthoFinder output from all 47 species | |
| Gb_25842 | No alias | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Gb_30270 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g15790.1 | LOC_Os03g15790 | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os04g59380.1 | LOC_Os04g59380 | C2H2 zinc finger transcription factor | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os11g06840.1 | LOC_Os11g06840 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Len_g01208 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_103943g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426153g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| MA_525155g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g21490.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04292 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26989 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g27885 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11728 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0053.g014168 | No alias | not classified & original description: CDS=1-1884 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018625 | No alias | not classified & original description: CDS=1-1434 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0147.g023140 | No alias | not classified & original description: CDS=905-2272 | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g081370.2.1 | Solyc04g081370 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Solyc07g063970.3.1 | Solyc07g063970 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Tin_g07821 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17139 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008786_P002 | Zm00001e008786 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019606_P002 | Zm00001e019606 | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e028937_P001 | Zm00001e028937 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |