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  5. LOC_Os01g56800.1

LOC_Os01g56800.1 (LOC_Os01g56800)


Aliases : LOC_Os01g56800

Description : TRAF1 endomembrane trafficking ATG6-stability regulator protein


Gene families : OG0003009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003009_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os01g56800.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00232980 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.02 OrthoFinder output from all 47 species
AT5G43560 No alias TRAF-like superfamily protein 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001366.11 UBP13 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Zm00001e003140_P001 Zm00001e003140 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.02 OrthoFinder output from all 47 species
Zm00001e018034_P004 Zm00001e018034 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.05 OrthoFinder output from all 47 species
Zm00001e019653_P002 Zm00001e019653 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.06 OrthoFinder output from all 47 species
Zm00001e027387_P004 Zm00001e027387 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species
Zm00001e032087_P004 Zm00001e032087 TRAF1 endomembrane trafficking ATG6-stability regulator protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 107 224
No external refs found!