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Aliases : PTAC12, HMR, LOC_Os01g56350
Description : PAP5/TAC12 cofactor of plastid-encoded RNA polymerase. transcriptional coactivator (HEMERA)
Gene families : OG0007916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007916_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G34640 | PTAC12, HMR | plastid transcriptionally active 12 | 0.16 | OrthoFinder output from all 47 species | |
| Als_g04370 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g30493 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036416 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.08 | OrthoFinder output from all 47 species | |
| Ceric.13G090100.1 | PTAC12, HMR,... | transcriptional coactivator *(HEMERA) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g32331 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01021555001 | PTAC12, HMR | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_08037 | PTAC12, HMR | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.09 | OrthoFinder output from all 47 species | |
| Lfl_g05496 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_10428614g0010 | PTAC12, HMR | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.03 | OrthoFinder output from all 47 species | |
| MA_8815984g0010 | PTAC12, HMR | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.07 | OrthoFinder output from all 47 species | |
| Mp1g24680.1 | PTAC12, HMR | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.14 | OrthoFinder output from all 47 species | |
| Nbi_g13784 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g03883 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57957 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0102.g019917 | PTAC12, HMR | transcriptional coactivator *(HEMERA) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49988 | No alias | transcriptional coactivator *(HEMERA) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g070390.3.1 | PTAC12, HMR,... | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.12 | OrthoFinder output from all 47 species | |
| Zm00001e019697_P001 | PTAC12, HMR,... | PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... | 0.24 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |