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  5. LOC_Os01g55795.1

LOC_Os01g55795.1 (LOC_Os01g55795)


Aliases : LOC_Os01g55795

Description : GTPase effector (BDR)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55795.1
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00180180 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00165p00000750 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G75160 No alias Protein of unknown function (DUF620) 0.06 OrthoFinder output from all 47 species
AT3G55720 No alias Protein of unknown function (DUF620) 0.02 OrthoFinder output from all 47 species
AT5G66740 No alias Protein of unknown function (DUF620) 0.04 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03158 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15973 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14261 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G036700.1 Ceric.33G036700 GTPase effector *(BDR) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g02214 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11719 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02503 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009692001 No alias No description available 0.06 OrthoFinder output from all 47 species
Gb_31528 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Len_g01245 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19621 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29419 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03609 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15972 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01139 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03053 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11922 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024239 No alias GTPase effector *(BDR) & original description: CDS=316-1776 0.03 OrthoFinder output from all 47 species
Sam_g11658 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11659 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19310 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19311 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g085490.2.1 Solyc02g085490 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Solyc05g052860.3.1 Solyc05g052860 GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species
Solyc07g022840.1.1 Solyc07g022840 GTPase effector (BDR) 0.07 OrthoFinder output from all 47 species
Spa_g03708 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41215 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55614 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Zm00001e028997_P004 Zm00001e028997 GTPase effector (BDR) 0.12 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 127 370
No external refs found!