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  5. LOC_Os01g55770.1

LOC_Os01g55770.1 (LOC_Os01g55770)


Aliases : LOC_Os01g55770

Description : no hits & (original description: none)


Gene families : OG0005086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005086_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55770.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT5G08060 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.09 OrthoFinder output from all 47 species
Als_g12636 No alias component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.04 OrthoFinder output from all 47 species
Aop_g48944 No alias component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene59959.t1 Aspi01Gene59959 component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.02 OrthoFinder output from all 47 species
Ceric.24G035900.1 Ceric.24G035900 component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.03 OrthoFinder output from all 47 species
Cre12.g484700 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_35689 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g16257 No alias component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.03 OrthoFinder output from all 47 species
Mp1g12850.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g52350 No alias component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.02 OrthoFinder output from all 47 species
Solyc02g088930.4.1 Solyc02g088930 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g22383 No alias component *(NDUFA7/B14.5a) of NADH dehydrogenase complex... 0.02 OrthoFinder output from all 47 species
Zm00001e029000_P003 Zm00001e029000 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004298 threonine-type endopeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070003 threonine-type peptidase activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!