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  5. LOC_Os01g55570.1

LOC_Os01g55570.1 (LOC_Os01g55570)


Aliases : LOC_Os01g55570

Description : no hits & (original description: none)


Gene families : OG0000444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55570.1
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272260 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.07 OrthoFinder output from all 47 species
AMTR_s00038p00072170 evm_27.TU.AmTr_v1... Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 OrthoFinder output from all 47 species
AT1G52220 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.12 OrthoFinder output from all 47 species
AT2G46820 PTAC8, TMP14, PSI-P, PSAP photosystem I P subunit 0.24 OrthoFinder output from all 47 species
AT4G01150 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.1 OrthoFinder output from all 47 species
Adi_g008425 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Adi_g011486 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Adi_g011488 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Adi_g023582 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Adi_g075200 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Adi_g075201 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Adi_g075653 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aev_g30164 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Aev_g34361 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Ala_g00864 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.14 OrthoFinder output from all 47 species
Ala_g00922 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Als_g10532 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Als_g27752 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Aob_g02852 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Aob_g16994 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aob_g35859 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Aop_g00252 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.13 OrthoFinder output from all 47 species
Aop_g49644 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Aop_g70950 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46854.t1 Aspi01Gene46854 regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Azfi_s0110.g045491 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Azfi_s0335.g065535 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Cba_g02293 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Cba_g09234 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Ceric.05G101400.1 Ceric.05G101400 regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ceric.08G028200.1 Ceric.08G028200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Ceric.25G072200.1 Ceric.25G072200 regulatory factor *(CURT) of thylakoid grana stacking &... 0.11 OrthoFinder output from all 47 species
Ceric.26G013600.1 Ceric.26G013600 regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000849.28 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g00365 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dac_g08388 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dac_g10202 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Dac_g25874 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g05104 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Dcu_g10196 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Dcu_g34747 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dcu_g41769 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dde_g01903 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Dde_g06506 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Dde_g46066 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Dde_g50772 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ehy_g05318 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Ehy_g19545 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Ehy_g25382 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Ehy_g28043 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
GSVIVT01017074001 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.03 OrthoFinder output from all 47 species
GSVIVT01027036001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 OrthoFinder output from all 47 species
GSVIVT01027447001 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.14 OrthoFinder output from all 47 species
GSVIVT01028749001 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.05 OrthoFinder output from all 47 species
Gb_09245 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.07 OrthoFinder output from all 47 species
Gb_37042 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g10683 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.14 OrthoFinder output from all 47 species
Len_g15575 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Len_g17885 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Len_g18439 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.19 OrthoFinder output from all 47 species
Len_g28315 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.15 OrthoFinder output from all 47 species
Len_g38767 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Len_g57586 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Len_g57589 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Lfl_g19110 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Lfl_g19368 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Lfl_g21744 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Lfl_g34028 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
MA_60075g0010 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_734271g0010 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
MA_904218g0010 PTAC8, TMP14, PSI-P, PSAP no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Mp1g25670.1 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.15 OrthoFinder output from all 47 species
Mp6g20800.1 PTAC8, TMP14, PSI-P, PSAP Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.15 OrthoFinder output from all 47 species
Mp6g20860.1 No alias Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.19 OrthoFinder output from all 47 species
Msp_g04797 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.11 OrthoFinder output from all 47 species
Msp_g04798 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.1 OrthoFinder output from all 47 species
Msp_g05299 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Msp_g06759 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Msp_g40930 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Nbi_g03415 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.12 OrthoFinder output from all 47 species
Nbi_g06087 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Nbi_g28257 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Ore_g09525 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ore_g27720 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Pir_g00176 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Pir_g00327 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.09 OrthoFinder output from all 47 species
Pir_g48383 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Pir_g64873 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Pnu_g11391 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.07 OrthoFinder output from all 47 species
Pnu_g16623 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.08 OrthoFinder output from all 47 species
Pnu_g19759 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Pnu_g27450 PTAC8, TMP14, PSI-P, PSAP regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Pnu_g32750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_11960V3.1 Pp3c16_11960 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c8_17810V3.1 Pp3c8_17810 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g10902 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ppi_g18065 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Ppi_g18345 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ppi_g19920 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005098 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007392 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020672 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Sam_g06947 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Sam_g06948 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Sam_g28663 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Sam_g38625 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Smo49217 No alias Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc01g095430.3.1 Solyc01g095430 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.18 OrthoFinder output from all 47 species
Solyc06g066620.4.1 Solyc06g066620 Protein CURVATURE THYLAKOID 1C, chloroplastic... 0.07 OrthoFinder output from all 47 species
Solyc10g005050.3.1 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.18 OrthoFinder output from all 47 species
Solyc10g011770.4.1 Solyc10g011770 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 OrthoFinder output from all 47 species
Solyc11g010480.2.1 Solyc11g010480 Protein CURVATURE THYLAKOID 1D, chloroplastic... 0.07 OrthoFinder output from all 47 species
Spa_g05035 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Spa_g23069 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.15 OrthoFinder output from all 47 species
Spa_g24039 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Tin_g01454 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Tin_g05372 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Tin_g13497 No alias regulatory factor *(CURT) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Zm00001e000193_P001 Zm00001e000193 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.09 OrthoFinder output from all 47 species
Zm00001e002212_P002 PTAC8, TMP14,... Protein CURVATURE THYLAKOID 1B, chloroplastic... 0.07 OrthoFinder output from all 47 species
Zm00001e023473_P001 Zm00001e023473 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.15 OrthoFinder output from all 47 species
Zm00001e029009_P001 Zm00001e029009 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Zm00001e030948_P002 Zm00001e030948 Protein CURVATURE THYLAKOID 1A, chloroplastic... 0.11 OrthoFinder output from all 47 species
Zm00001e034870_P002 PTAC8, TMP14,... no hits & (original description: none) 0.17 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR025564 CAAD_dom 66 150
No external refs found!