AMTR_s00063p00197920 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.78

Description : Rho GTPase-activating protein 7 OS=Arabidopsis thaliana


Gene families : OG_01_0001921 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001921_tree ,
OG_02_0001364 (LandPlants) Phylogenetic Tree(s): OG_02_0001364_tree ,
OG_03_0000985 (SeedPlants) Phylogenetic Tree(s): OG_03_0000985_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00197920
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AT5G12150 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.03 Archaeplastida
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.04 Archaeplastida
GSVIVT01003597001 No alias Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.06 Archaeplastida
LOC_Os03g15180.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g24180.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Smo442380 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g008770.3.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Solyc11g064880.2.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.04 LandPlants
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.06 LandPlants
LOC_Os03g24180.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 LandPlants
Smo442380 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.02 LandPlants
Solyc01g008770.3.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.07 LandPlants
AT5G19390 No alias Rho GTPase activation protein (RhoGAP) with PH domain 0.04 SeedPlants
GSVIVT01003597001 No alias Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana 0.02 SeedPlants
GSVIVT01037287001 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana 0.06 SeedPlants
LOC_Os03g24180.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.06 SeedPlants
Solyc01g008770.3.1 No alias Rho GTPase-activating protein 7 OS=Arabidopsis thaliana... 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005543 phospholipid binding IEA Interproscan
CC GO:0005622 intracellular anatomical structure IEA Interproscan
BP GO:0007165 signal transduction IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025757 MIP1_Leuzipper 601 687
IPR001849 PH_domain 21 124
IPR000198 RhoGAP_dom 181 325
No external refs found!