1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g55549.1

LOC_Os01g55549.1 (GL2, LOC_Os01g55549)


Aliases : GL2, LOC_Os01g55549

Description : transcription factor (HD-ZIP IV)


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55549.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g006830 HDG2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080315 HDG2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene47379.t1 PDF2, Aspi01Gene47379 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G042200.1 PDF2, Ceric.13G042200 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z007700.1 HDG12, Ceric.1Z007700 not classified & original description: pacid=50637294... 0.03 OrthoFinder output from all 47 species
Dcu_g15268 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g57890.1 PDF2, LOC_Os01g57890 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Len_g35702 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g03228 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08965 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27182 No alias HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 96 151
IPR002913 START_lipid-bd_dom 312 538
No external refs found!