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  5. LOC_Os01g55500.1

LOC_Os01g55500.1 (LOC_Os01g55500)


Aliases : LOC_Os01g55500

Description : solute transporter (NAT)


Gene families : OG0000475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00151p00089770 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Adi_g025465 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40712 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12772 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49672.t1 Aspi01Gene49672 solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67703.t1 Aspi01Gene67703 solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2748.g112888 No alias solute transporter *(NAT) & original description: CDS=518-1915 0.03 OrthoFinder output from all 47 species
Cba_g16647 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G071100.1 Ceric.09G071100 solute transporter *(NAT) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g12691 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12851 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24459 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06874 No alias solute transporter *(NAT) & original description: none 0.06 OrthoFinder output from all 47 species
Gb_26069 No alias solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Msp_g03973 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30058 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02988 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03023 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14820 No alias solute transporter *(NAT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003401 No alias solute transporter *(NAT) & original description: CDS=1-1707 0.02 OrthoFinder output from all 47 species
Sam_g06480 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Smo76475 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc02g072500.3.1 Solyc02g072500 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species
Solyc07g049320.4.1 Solyc07g049320 solute transporter (NAT) 0.02 OrthoFinder output from all 47 species
Spa_g07450 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02025 No alias solute transporter *(NAT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04574 No alias solute transporter *(NAT) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006213_P001 Zm00001e006213 solute transporter (NAT) 0.03 OrthoFinder output from all 47 species
Zm00001e009683_P001 Zm00001e009683 solute transporter (NAT) 0.06 OrthoFinder output from all 47 species
Zm00001e021544_P001 Zm00001e021544 solute transporter (NAT) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006043 NCS2 32 435
No external refs found!