LOC_Os01g55270.1 (LOC_Os01g55270)


Aliases : LOC_Os01g55270

Description : no hits & (original description: none)


Gene families : OG0002172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002172_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55270.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Aev_g05067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025627 No alias not classified & original description: CDS=66-695 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020961.26 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g07636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021471001 No alias No description available 0.18 OrthoFinder output from all 47 species
Gb_30699 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_10429426g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp4g17050.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Pir_g40772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g08518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g47227 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g016670.3.1 Solyc08g016670 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Spa_g11992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14940 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Spa_g29222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019769_P001 Zm00001e019769 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007052 CS_dom 81 157
IPR015120 Siah-Interact_N 4 62
No external refs found!