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  5. LOC_Os01g55020.6

LOC_Os01g55020.6 (LOC_Os01g55020)


Aliases : LOC_Os01g55020

Description : no hits & (original description: none)


Gene families : OG0012519 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0012519_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g55020.6

Target Alias Description ECC score Gene Family Method Actions
AT1G28395 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.08 OrthoFinder output from all 47 species
AT1G70350 No alias unknown protein; Has 98 Blast hits to 98 proteins in 11... 0.08 OrthoFinder output from all 47 species
AT2G20585 NFD6 nuclear fusion defective 6 0.06 OrthoFinder output from all 47 species
AT2G33847 No alias unknown protein; LOCATED IN: chloroplast; BEST... 0.02 OrthoFinder output from all 47 species
GSVIVT01020598001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01032483001 No alias No description available 0.05 OrthoFinder output from all 47 species
Solyc02g077730.3.1 Solyc02g077730 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e016360_P002 NFD6, Zm00001e016360 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e029035_P001 NFD6, Zm00001e029035 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!