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  5. LOC_Os01g54270.1

LOC_Os01g54270.1 (CCD8, ATCCD8, MAX4,...)


Aliases : CCD8, ATCCD8, MAX4, LOC_Os01g54270

Description : carotenoid cleavage dioxygenase (CCD8)


Gene families : OG0004707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g54270.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00050p00227710 CCD8, ATCCD8,... Phytohormones.strigolactone.synthesis.CCD8 carotenoid... 0.02 OrthoFinder output from all 47 species
Adi_g000734 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.02 OrthoFinder output from all 47 species
Adi_g084453 CCD8, ATCCD8, MAX4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g084454 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.06 OrthoFinder output from all 47 species
Ala_g24764 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.07 OrthoFinder output from all 47 species
Aob_g27689 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.03 OrthoFinder output from all 47 species
Aob_g29470 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.09 OrthoFinder output from all 47 species
Aob_g29471 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.11 OrthoFinder output from all 47 species
Aob_g31374 CCD8, ATCCD8, MAX4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g43669 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.02 OrthoFinder output from all 47 species
Cba_g51493 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.02 OrthoFinder output from all 47 species
Cre08.g365851 CCD8, ATCCD8, MAX4 Phytohormones.strigolactone.synthesis.CCD8 carotenoid... 0.02 OrthoFinder output from all 47 species
Dac_g36929 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01035626001 CCD8, ATCCD8, MAX4 Phytohormones.strigolactone.synthesis.CCD8 carotenoid... 0.08 OrthoFinder output from all 47 species
LOC_Os01g38580.1 CCD8, ATCCD8,... carotenoid cleavage dioxygenase (CCD8) 0.05 OrthoFinder output from all 47 species
MA_39339g0010 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase (CCD8) 0.03 OrthoFinder output from all 47 species
Msp_g18274 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.05 OrthoFinder output from all 47 species
Msp_g38501 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.02 OrthoFinder output from all 47 species
Ore_g18706 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.04 OrthoFinder output from all 47 species
Ore_g26863 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.05 OrthoFinder output from all 47 species
Ore_g33293 CCD8, ATCCD8, MAX4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38821 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g27881 CCD8, ATCCD8, MAX4 carotenoid cleavage dioxygenase *(CCD8) & original... 0.03 OrthoFinder output from all 47 species
Smo173016 CCD8, ATCCD8, MAX4 Phytohormones.strigolactone.synthesis.CCD8 carotenoid... 0.05 OrthoFinder output from all 47 species
Solyc08g066650.3.1 CCD8, ATCCD8,... carotenoid cleavage dioxygenase (CCD8) 0.04 OrthoFinder output from all 47 species
Zm00001e019795_P001 CCD8, ATCCD8,... carotenoid cleavage dioxygenase (CCD8) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 87 550
IPR000477 RT_dom 618 767
No external refs found!