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  5. LOC_Os01g54170.1

LOC_Os01g54170.1 (LOC_Os01g54170)


Aliases : LOC_Os01g54170

Description : no hits & (original description: none)


Gene families : OG0000771 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000771_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g54170.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00092670 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Als_g23648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26438.t1 Aspi01Gene26438 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G070500.1 Ceric.25G070500 not classified & original description: pacid=50594676... 0.03 OrthoFinder output from all 47 species
Dac_g22156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01017006001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os01g10260.1 LOC_Os01g10260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g10310.1 LOC_Os01g10310 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_23866g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_764231g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g054130.1.1 Solyc06g054130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g061270.1.1 Solyc08g061270 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g02634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 64 148
No external refs found!