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  5. LOC_Os01g53520.1

LOC_Os01g53520.1 (BTI1, RTNLB1, LOC_Os01g53520)


Aliases : BTI1, RTNLB1, LOC_Os01g53520

Description : ER-associated protein (Reticulon)


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g53520.1
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G15280 No alias Reticulon family protein 0.03 OrthoFinder output from all 47 species
Adi_g020105 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Adi_g055054 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Aop_g09568 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Ceric.22G055300.1 Ceric.22G055300 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01019440001 No alias Reticulon-like protein B4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g22662 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
MA_8439835g0010 RTNLB4, BTI3 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g23134 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Ore_g37046 BTI1, RTNLB1 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Pp3c3_26340V3.1 RTNLB3, Pp3c3_26340 Reticulon family protein 0.02 OrthoFinder output from all 47 species
Solyc01g107620.4.1 Solyc01g107620 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc06g049060.3.1 Solyc06g049060 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc10g011870.3.1 Solyc10g011870 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Zm00001e006599_P001 Zm00001e006599 ER-associated protein (Reticulon) 0.02 OrthoFinder output from all 47 species
Zm00001e019265_P002 Zm00001e019265 ER-associated protein (Reticulon) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 69 223
No external refs found!